Insights into olfactory ensheathing cell development from a laser-microdissection and transcriptome-profiling approach. |
2020 |
Glia |
Perera SN, Williams RM, Lyne R, Stubbs O, Buehler DP, et al.
|
InterMineR: an R package for InterMine databases. |
2019 |
Bioinformatics |
Kyritsis KA, Wang B, Sullivan J, Lyne R, Micklem G
|
Correction: esyN: Network Building, Sharing and Publishing. |
2019 |
PloS one |
Bean DM, Heimbach J, Ficorella L, Micklem G, Oliver SG, et al.
|
Encompassing new use cases - level 3.0 of the HUPO-PSI format for molecular interactions. |
2018 |
BMC bioinformatics |
Sivade Dumousseau M, Alonso-López D, Ammari M, Bradley G, Campbell NH, et al.
|
Comparative genomics of bdelloid rotifers: Insights from desiccating and nondesiccating species. |
2018 |
PLoS biology |
Nowell RW, Almeida P, Wilson CG, Smith TP, Fontaneto D, et al.
|
The InterMine Android app: Cross-organism genomic data in your pocket. |
2018 |
F1000Research |
Komkova D, Lyne R, Sullivan J, Yehudi Y, Micklem G
|
ComplexViewer: visualization of curated macromolecular complexes. |
2017 |
Bioinformatics |
Combe CW, Sivade MD, Hermjakob H, Heimbach J, Meldal BHM, et al.
|
Correction for Guo et al., "Poly(A) Signals Located near the 5' End of Genes Are Silenced by a General Mechanism That Prevents Premature 3'-End Processing". |
2017 |
Molecular and cellular biology |
Guo J, Garrett M, Micklem G, Brogna S
|
Empirical Bayes method for reducing false discovery rates of correlation matrices with block diagonal structure. |
2017 |
BMC bioinformatics |
Pacini C, Ajioka JW, Micklem G
|
Insights into electrosensory organ development, physiology and evolution from a lateral line-enriched transcriptome. |
2017 |
eLife |
Modrell MS, Lyne M, Carr AR, Zakon HH, Buckley D, et al.
|
Urinary Exosomes Contain MicroRNAs Capable of Paracrine Modulation of Tubular Transporters in Kidney. |
2017 |
Scientific reports |
Gracia T, Wang X, Su Y, Norgett EE, Williams TL, et al.
|
ThaleMine: A Warehouse for Arabidopsis Data Integration and Discovery. |
2017 |
Plant & cell physiology |
Krishnakumar V, Contrino S, Cheng CY, Belyaeva I, Ferlanti ES, et al.
|
Genomes of coral dinoflagellate symbionts highlight evolutionary adaptations conducive to a symbiotic lifestyle. |
2016 |
Scientific reports |
Aranda M, Li Y, Liew YJ, Baumgarten S, Simakov O, et al.
|
Cross-organism analysis using InterMine. |
2015 |
Genesis (New York, N.Y. : 2000) |
Lyne R, Sullivan J, Butano D, Contrino S, Heimbach J, et al.
|
Expression of multiple horizontally acquired genes is a hallmark of both vertebrate and invertebrate genomes. |
2015 |
Genome biology |
Crisp A, Boschetti C, Perry M, Tunnacliffe A, Micklem G
|
toxoMine: an integrated omics data warehouse for Toxoplasma gondii systems biology research. |
2015 |
Database |
Rhee DB, Croken MM, Shieh KR, Sullivan J, Micklem G, et al.
|
Araport: the Arabidopsis information portal. |
2015 |
Nucleic acids research |
Krishnakumar V, Hanlon MR, Contrino S, Ferlanti ES, Karamycheva S, et al.
|
InterMine: extensive web services for modern biology. |
2014 |
Nucleic acids research |
Kalderimis A, Lyne R, Butano D, Contrino S, Lyne M, et al.
|
esyN: network building, sharing and publishing. |
2014 |
PloS one |
Bean DM, Heimbach J, Ficorella L, Micklem G, Oliver SG, et al.
|
Identification of microRNAs in the coral Stylophora pistillata. |
2014 |
PloS one |
Liew YJ, Aranda M, Carr A, Baumgarten S, Zoccola D, et al.
|
BioJS DAGViewer: A reusable JavaScript component for displaying directed graphs. |
2014 |
F1000Research |
Kalderimis A, Stepan R, Sullivan J, Lyne R, Lyne M, et al.
|
Integrating microRNA and mRNA expression profiling in Symbiodinium microadriaticum, a dinoflagellate symbiont of reef-building corals. |
2013 |
BMC genomics |
Baumgarten S, Bayer T, Aranda M, Liew YJ, Carr A, et al.
|
Activity of a heptad of transcription factors is associated with stem cell programs and clinical outcome in acute myeloid leukemia. |
2013 |
Blood |
Diffner E, Beck D, Gudgin E, Thoms JA, Knezevic K, et al.
|
The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies. |
2013 |
Journal of biomedical semantics |
Katayama T, Wilkinson MD, Micklem G, Kawashima S, Yamaguchi A, et al.
|
metabolicMine: an integrated genomics, genetics and proteomics data warehouse for common metabolic disease research. |
2013 |
Database |
Lyne M, Smith RN, Lyne R, Aleksic J, Hu F, et al.
|
InterMOD: integrated data and tools for the unification of model organism research. |
2013 |
Scientific reports |
Sullivan J, Karra K, Moxon SA, Vallejos A, Motenko H, et al.
|
InterMine: a flexible data warehouse system for the integration and analysis of heterogeneous biological data. |
2012 |
Bioinformatics |
Smith RN, Aleksic J, Butano D, Carr A, Contrino S, et al.
|
Multiple functionally divergent and conserved copies of alpha tubulin in bdelloid rotifers. |
2012 |
BMC evolutionary biology |
Eyres I, Frangedakis E, Fontaneto D, Herniou EA, Boschetti C, et al.
|
YeastMine--an integrated data warehouse for Saccharomyces cerevisiae data as a multipurpose tool-kit. |
2012 |
Database |
Balakrishnan R, Park J, Karra K, Hitz BC, Binkley G, et al.
|
modMine: flexible access to modENCODE data. |
2012 |
Nucleic acids research |
Contrino S, Smith RN, Butano D, Carr A, Hu F, et al.
|
Biochemical diversification through foreign gene expression in bdelloid rotifers. |
2012 |
PLoS genetics |
Boschetti C, Carr A, Crisp A, Eyres I, Wang-Koh Y, et al.
|
MicroRNAs dysregulated in breast cancer preferentially target key oncogenic pathways. |
2011 |
Molecular bioSystems |
Lim WK, Micklem G
|
The impact of quantitative optimization of hybridization conditions on gene expression analysis. |
2011 |
BMC bioinformatics |
Sykacek P, Kreil DP, Meadows LA, Auburn RP, Fischer B, et al.
|
Poly(A) signals located near the 5' end of genes are silenced by a general mechanism that prevents premature 3'-end processing. |
2011 |
Molecular and cellular biology |
Guo J, Garrett M, Micklem G, Brogna S
|
The modENCODE Data Coordination Center: lessons in harvesting comprehensive experimental details. |
2011 |
Database |
Washington NL, Stinson EO, Perry MD, Ruzanov P, Contrino S, et al.
|
Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project. |
2010 |
Science |
Gerstein MB, Lu ZJ, Van Nostrand EL, Cheng C, Arshinoff BI, et al.
|
Identification of functional elements and regulatory circuits by Drosophila modENCODE. |
2010 |
Science |
Roy S, Ernst J, Kharchenko PV, Kheradpour P, Negre N, et al.
|
Identification and analysis of serpin-family genes by homology and synteny across the 12 sequenced Drosophilid genomes. |
2009 |
BMC genomics |
Garrett M, Fullaondo A, Troxler L, Micklem G, Gubb D
|
Unlocking the secrets of the genome. |
2009 |
Nature |
Celniker SE, Dillon LA, Gerstein MB, Gunsalus KC, Henikoff S, et al.
|
Phylogenetic and genomewide analyses suggest a functional relationship between kayak, the Drosophila fos homolog, and fig, a predicted protein phosphatase 2c nested within a kayak intron. |
2007 |
Genetics |
Hudson SG, Garrett MJ, Carlson JW, Micklem G, Celniker SE, et al.
|
Bayesian modelling of shared gene function. |
2007 |
Bioinformatics |
Sykacek P, Clarkson R, Print C, Furlong R, Micklem G
|
FlyMine: an integrated database for Drosophila and Anopheles genomics. |
2007 |
Genome biology |
Lyne R, Smith R, Rutherford K, Wakeling M, Varley A, et al.
|
Prospero acts as a binary switch between self-renewal and differentiation in Drosophila neural stem cells. |
2006 |
Developmental cell |
Choksi SP, Southall TD, Bossing T, Edoff K, de Wit E, et al.
|
A friendly statistics package for microarray analysis. |
2005 |
Bioinformatics |
Sykacek P, Furlong RA, Micklem G
|
Regions of human chromosome 2 (2q32-q35) and mouse chromosome 1 show synteny with the pufferfish genome (Fugu rubripes). |
1997 |
Genomics |
Schofield JP, Elgar G, Greystrong J, Lye G, Deadman R, et al.
|
Sequence comparison of human and yeast telomeres identifies structurally distinct subtelomeric domains. |
1997 |
Human molecular genetics |
Flint J, Bates GP, Clark K, Dorman A, Willingham D, et al.
|
The relationship between chromosome structure and function at a human telomeric region. |
1997 |
Nature genetics |
Flint J, Thomas K, Micklem G, Raynham H, Clark K, et al.
|
The BRC repeats are conserved in mammalian BRCA2 proteins. |
1997 |
Human molecular genetics |
Bignell G, Micklem G, Stratton MR, Ashworth A, Wooster R
|
Molecular cloning of tissue-specific transcripts of a transketolase-related gene: implications for the evolution of new vertebrate genes. |
1996 |
Genomics |
Coy JF, Dübel S, Kioschis P, Thomas K, Micklem G, et al.
|
Identification of the breast cancer susceptibility gene BRCA2. |
1995 |
Nature |
Wooster R, Bignell G, Lancaster J, Swift S, Seal S, et al.
|
Comparative sequence analysis of the human and pufferfish Huntington's disease genes. |
1995 |
Nature genetics |
Baxendale S, Abdulla S, Elgar G, Buck D, Berks M, et al.
|
The sequence complexity of exons trapped from the mouse genome. |
1994 |
Current biology |
Nehls M, Pfeifer D, Micklem G, Schmoor C, Boehm T
|
Dissecting the temporal requirements for homeotic gene function. |
1994 |
Development |
Castelli-Gair J, Greig S, Micklem G, Akam M
|
Structure and expression of the Huntington's disease gene: evidence against simple inactivation due to an expanded CAG repeat. |
1994 |
Somatic cell and molecular genetics |
Ambrose CM, Duyao MP, Barnes G, Bates GP, Lin CS, et al.
|
Yeast origin recognition complex is involved in DNA replication and transcriptional silencing. |
1993 |
Nature |
Micklem G, Rowley A, Harwood J, Nasmyth K, Diffley JF
|
A yeast silencer contains sequences that can promote autonomous plasmid replication and transcriptional activation. |
1987 |
Cell |
Brand AH, Micklem G, Nasmyth K
|